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Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees.

Identifieur interne : 000F95 ( Main/Exploration ); précédent : 000F94; suivant : 000F96

Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees.

Auteurs : Kieron D. Edwards [Royaume-Uni] ; Naoki Takata [Suède] ; Mikael Johansson [Suède, Allemagne] ; Manuela Jurca [Suède] ; Ond Ej Novák [République tchèque] ; Eva Hényková [République tchèque, Suède] ; Silvia Liverani [Royaume-Uni] ; Iwanka Kozarewa [Suède] ; Miroslav Strnad [République tchèque] ; Andrew J. Millar [Royaume-Uni] ; Karin Ljung [Suède] ; Maria E. Eriksson [Suède]

Source :

RBID : pubmed:29520862

Descripteurs français

English descriptors

Abstract

Trees are carbon dioxide sinks and major producers of terrestrial biomass with distinct seasonal growth patterns. Circadian clocks enable the coordination of physiological and biochemical temporal activities, optimally regulating multiple traits including growth. To dissect the clock's role in growth, we analysed Populus tremula × P. tremuloides trees with impaired clock function due to down-regulation of central clock components. late elongated hypocotyl (lhy-10) trees, in which expression of LHY1 and LHY2 is reduced by RNAi, have a short free-running period and show disrupted temporal regulation of gene expression and reduced growth, producing 30-40% less biomass than wild-type trees. Genes important in growth regulation were expressed with an earlier phase in lhy-10, and CYCLIN D3 expression was misaligned and arrhythmic. Levels of cytokinins were lower in lhy-10 trees, which also showed a change in the time of peak expression of genes associated with cell division and growth. However, auxin levels were not altered in lhy-10 trees, and the size of the lignification zone in the stem showed a relative increase. The reduced growth rate and anatomical features of lhy-10 trees were mainly caused by misregulation of cell division, which may have resulted from impaired clock function.

DOI: 10.1111/pce.13185
PubMed: 29520862
PubMed Central: PMC6001645


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Le document en format XML

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<country xml:lang="fr">République tchèque</country>
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<name sortKey="Liverani, Silvia" sort="Liverani, Silvia" uniqKey="Liverani S" first="Silvia" last="Liverani">Silvia Liverani</name>
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<nlm:affiliation>Department of Statistics, University of Warwick, Coventry, CV4 7AL, UK.</nlm:affiliation>
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<name sortKey="Kozarewa, Iwanka" sort="Kozarewa, Iwanka" uniqKey="Kozarewa I" first="Iwanka" last="Kozarewa">Iwanka Kozarewa</name>
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<name sortKey="Eriksson, Maria E" sort="Eriksson, Maria E" uniqKey="Eriksson M" first="Maria E" last="Eriksson">Maria E. Eriksson</name>
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<title level="j">Plant, cell & environment</title>
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<keywords scheme="KwdEn" xml:lang="en">
<term>Biomass (MeSH)</term>
<term>Cambium (physiology)</term>
<term>Cell Division (genetics)</term>
<term>Circadian Clocks (genetics)</term>
<term>Cytokinins (metabolism)</term>
<term>Gene Expression Regulation, Plant (MeSH)</term>
<term>Indoleacetic Acids (metabolism)</term>
<term>Lignin (metabolism)</term>
<term>Metabolome (MeSH)</term>
<term>Metabolomics (MeSH)</term>
<term>Mutation (genetics)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
<term>Plants, Genetically Modified (MeSH)</term>
<term>Populus (cytology)</term>
<term>Populus (genetics)</term>
<term>Populus (growth & development)</term>
<term>Protein Binding (MeSH)</term>
<term>RNA Interference (MeSH)</term>
<term>Trees (cytology)</term>
<term>Trees (genetics)</term>
<term>Trees (growth & development)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr">
<term>Acides indolacétiques (métabolisme)</term>
<term>Arbres (croissance et développement)</term>
<term>Arbres (cytologie)</term>
<term>Arbres (génétique)</term>
<term>Biomasse (MeSH)</term>
<term>Cambium (physiologie)</term>
<term>Cytokinine (métabolisme)</term>
<term>Division cellulaire (génétique)</term>
<term>Horloges circadiennes (génétique)</term>
<term>Interférence par ARN (MeSH)</term>
<term>Liaison aux protéines (MeSH)</term>
<term>Lignine (métabolisme)</term>
<term>Mutation (génétique)</term>
<term>Métabolome (MeSH)</term>
<term>Métabolomique (MeSH)</term>
<term>Populus (croissance et développement)</term>
<term>Populus (cytologie)</term>
<term>Populus (génétique)</term>
<term>Protéines végétales (génétique)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Régulation de l'expression des gènes végétaux (MeSH)</term>
<term>Végétaux génétiquement modifiés (MeSH)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en">
<term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en">
<term>Cytokinins</term>
<term>Indoleacetic Acids</term>
<term>Lignin</term>
<term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr">
<term>Arbres</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="cytologie" xml:lang="fr">
<term>Arbres</term>
<term>Populus</term>
</keywords>
<keywords scheme="MESH" qualifier="cytology" xml:lang="en">
<term>Populus</term>
<term>Trees</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en">
<term>Cell Division</term>
<term>Circadian Clocks</term>
<term>Mutation</term>
<term>Populus</term>
<term>Trees</term>
</keywords>
<keywords scheme="MESH" qualifier="growth & development" xml:lang="en">
<term>Populus</term>
<term>Trees</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr">
<term>Arbres</term>
<term>Division cellulaire</term>
<term>Horloges circadiennes</term>
<term>Mutation</term>
<term>Populus</term>
<term>Protéines végétales</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr">
<term>Acides indolacétiques</term>
<term>Cytokinine</term>
<term>Lignine</term>
<term>Protéines végétales</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr">
<term>Cambium</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en">
<term>Cambium</term>
</keywords>
<keywords scheme="MESH" xml:lang="en">
<term>Biomass</term>
<term>Gene Expression Regulation, Plant</term>
<term>Metabolome</term>
<term>Metabolomics</term>
<term>Plants, Genetically Modified</term>
<term>Protein Binding</term>
<term>RNA Interference</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr">
<term>Biomasse</term>
<term>Interférence par ARN</term>
<term>Liaison aux protéines</term>
<term>Métabolome</term>
<term>Métabolomique</term>
<term>Régulation de l'expression des gènes végétaux</term>
<term>Végétaux génétiquement modifiés</term>
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<front>
<div type="abstract" xml:lang="en">Trees are carbon dioxide sinks and major producers of terrestrial biomass with distinct seasonal growth patterns. Circadian clocks enable the coordination of physiological and biochemical temporal activities, optimally regulating multiple traits including growth. To dissect the clock's role in growth, we analysed Populus tremula × P. tremuloides trees with impaired clock function due to down-regulation of central clock components. late elongated hypocotyl (lhy-10) trees, in which expression of LHY1 and LHY2 is reduced by RNAi, have a short free-running period and show disrupted temporal regulation of gene expression and reduced growth, producing 30-40% less biomass than wild-type trees. Genes important in growth regulation were expressed with an earlier phase in lhy-10, and CYCLIN D3 expression was misaligned and arrhythmic. Levels of cytokinins were lower in lhy-10 trees, which also showed a change in the time of peak expression of genes associated with cell division and growth. However, auxin levels were not altered in lhy-10 trees, and the size of the lignification zone in the stem showed a relative increase. The reduced growth rate and anatomical features of lhy-10 trees were mainly caused by misregulation of cell division, which may have resulted from impaired clock function.</div>
</front>
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<DateCompleted>
<Year>2019</Year>
<Month>05</Month>
<Day>20</Day>
</DateCompleted>
<DateRevised>
<Year>2020</Year>
<Month>04</Month>
<Day>15</Day>
</DateRevised>
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<Journal>
<ISSN IssnType="Electronic">1365-3040</ISSN>
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<Volume>41</Volume>
<Issue>6</Issue>
<PubDate>
<Year>2018</Year>
<Month>06</Month>
</PubDate>
</JournalIssue>
<Title>Plant, cell & environment</Title>
<ISOAbbreviation>Plant Cell Environ</ISOAbbreviation>
</Journal>
<ArticleTitle>Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees.</ArticleTitle>
<Pagination>
<MedlinePgn>1468-1482</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1111/pce.13185</ELocationID>
<Abstract>
<AbstractText>Trees are carbon dioxide sinks and major producers of terrestrial biomass with distinct seasonal growth patterns. Circadian clocks enable the coordination of physiological and biochemical temporal activities, optimally regulating multiple traits including growth. To dissect the clock's role in growth, we analysed Populus tremula × P. tremuloides trees with impaired clock function due to down-regulation of central clock components. late elongated hypocotyl (lhy-10) trees, in which expression of LHY1 and LHY2 is reduced by RNAi, have a short free-running period and show disrupted temporal regulation of gene expression and reduced growth, producing 30-40% less biomass than wild-type trees. Genes important in growth regulation were expressed with an earlier phase in lhy-10, and CYCLIN D3 expression was misaligned and arrhythmic. Levels of cytokinins were lower in lhy-10 trees, which also showed a change in the time of peak expression of genes associated with cell division and growth. However, auxin levels were not altered in lhy-10 trees, and the size of the lignification zone in the stem showed a relative increase. The reduced growth rate and anatomical features of lhy-10 trees were mainly caused by misregulation of cell division, which may have resulted from impaired clock function.</AbstractText>
<CopyrightInformation>2018 The Authors. Plant, Cell & Environment published by John Wiley & Sons Ltd.</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y">
<Author ValidYN="Y">
<LastName>Edwards</LastName>
<ForeName>Kieron D</ForeName>
<Initials>KD</Initials>
<AffiliationInfo>
<Affiliation>School of Biological Sciences, C.H. Waddington Building, University of Edinburgh, Edinburgh, EH9 3BF, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Takata</LastName>
<ForeName>Naoki</ForeName>
<Initials>N</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, 901 87, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Johansson</LastName>
<ForeName>Mikael</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, 901 87, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
<AffiliationInfo>
<Affiliation>RNA Biology and Molecular Physiology, Bielefeld University, 33615, Bielefeld, Germany.</Affiliation>
</AffiliationInfo>
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<LastName>Jurca</LastName>
<ForeName>Manuela</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, 901 87, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
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<LastName>Novák</LastName>
<ForeName>Ondřej</ForeName>
<Initials>O</Initials>
<AffiliationInfo>
<Affiliation>Laboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany ASCR and Palacký University, 783 71, Olomouc, Czech Republic.</Affiliation>
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<ForeName>Eva</ForeName>
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</AffiliationInfo>
<AffiliationInfo>
<Affiliation>Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
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<LastName>Liverani</LastName>
<ForeName>Silvia</ForeName>
<Initials>S</Initials>
<AffiliationInfo>
<Affiliation>Department of Statistics, University of Warwick, Coventry, CV4 7AL, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Kozarewa</LastName>
<ForeName>Iwanka</ForeName>
<Initials>I</Initials>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, 901 87, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Strnad</LastName>
<ForeName>Miroslav</ForeName>
<Initials>M</Initials>
<AffiliationInfo>
<Affiliation>Laboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany ASCR and Palacký University, 783 71, Olomouc, Czech Republic.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Millar</LastName>
<ForeName>Andrew J</ForeName>
<Initials>AJ</Initials>
<Identifier Source="ORCID">0000-0003-1756-3654</Identifier>
<AffiliationInfo>
<Affiliation>School of Biological Sciences, C.H. Waddington Building, University of Edinburgh, Edinburgh, EH9 3BF, UK.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Ljung</LastName>
<ForeName>Karin</ForeName>
<Initials>K</Initials>
<AffiliationInfo>
<Affiliation>Department of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, 901 83, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y">
<LastName>Eriksson</LastName>
<ForeName>Maria E</ForeName>
<Initials>ME</Initials>
<Identifier Source="ORCID">0000-0003-2038-4892</Identifier>
<AffiliationInfo>
<Affiliation>Department of Plant Physiology, Umeå Plant Science Centre, Umeå University, 901 87, Umeå, Sweden.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<GrantList CompleteYN="Y">
<Grant>
<GrantID>BB/D019621/1</GrantID>
<Agency>Biotechnology and Biological Sciences Research Council</Agency>
<Country>United Kingdom</Country>
</Grant>
<Grant>
<GrantID>G19886/2</GrantID>
<Agency>Biotechnology and Biological Sciences Research Council</Agency>
<Country>United Kingdom</Country>
</Grant>
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<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
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<ArticleDate DateType="Electronic">
<Year>2018</Year>
<Month>04</Month>
<Day>15</Day>
</ArticleDate>
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<MedlineJournalInfo>
<Country>United States</Country>
<MedlineTA>Plant Cell Environ</MedlineTA>
<NlmUniqueID>9309004</NlmUniqueID>
<ISSNLinking>0140-7791</ISSNLinking>
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<ChemicalList>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D003583">Cytokinins</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D007210">Indoleacetic Acids</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance>
</Chemical>
<Chemical>
<RegistryNumber>9005-53-2</RegistryNumber>
<NameOfSubstance UI="D008031">Lignin</NameOfSubstance>
</Chemical>
</ChemicalList>
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<MeshHeadingList>
<MeshHeading>
<DescriptorName UI="D018533" MajorTopicYN="N">Biomass</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D058506" MajorTopicYN="N">Cambium</DescriptorName>
<QualifierName UI="Q000502" MajorTopicYN="N">physiology</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D002455" MajorTopicYN="N">Cell Division</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D057906" MajorTopicYN="N">Circadian Clocks</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
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<MeshHeading>
<DescriptorName UI="D003583" MajorTopicYN="N">Cytokinins</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
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<MeshHeading>
<DescriptorName UI="D008031" MajorTopicYN="N">Lignin</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
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<MeshHeading>
<DescriptorName UI="D055442" MajorTopicYN="N">Metabolome</DescriptorName>
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<DescriptorName UI="D055432" MajorTopicYN="N">Metabolomics</DescriptorName>
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<DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
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<MeshHeading>
<DescriptorName UI="D030821" MajorTopicYN="N">Plants, Genetically Modified</DescriptorName>
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<MeshHeading>
<DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName>
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<MeshHeading>
<DescriptorName UI="D011485" MajorTopicYN="N">Protein Binding</DescriptorName>
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<MeshHeading>
<DescriptorName UI="D034622" MajorTopicYN="N">RNA Interference</DescriptorName>
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<MeshHeading>
<DescriptorName UI="D014197" MajorTopicYN="N">Trees</DescriptorName>
<QualifierName UI="Q000166" MajorTopicYN="N">cytology</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="Y">growth & development</QualifierName>
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<Keyword MajorTopicYN="Y">biomass production</Keyword>
<Keyword MajorTopicYN="Y">cell division</Keyword>
<Keyword MajorTopicYN="Y">circadian clock</Keyword>
<Keyword MajorTopicYN="Y">cytokinin</Keyword>
<Keyword MajorTopicYN="Y">growth</Keyword>
<Keyword MajorTopicYN="Y">lignification</Keyword>
<Keyword MajorTopicYN="Y">photoperiod</Keyword>
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